Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.93□□□□□ -0.5
P06344 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.93□□□□□ -0.5
P06344 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.93□□□□□ -0.5
P06344 Gm18473-201ENSMUST00000220543 868 ntBASIC11.93□□□□□ -0.5
P06344 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.93□□□□□ -0.5
P06344 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.93□□□□□ -0.5
P06344 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
P06344 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.93□□□□□ -0.5
P06344 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.93□□□□□ -0.5
P06344 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.92□□□□□ -0.5
P06344 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
P06344 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.92□□□□□ -0.5
P06344 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.92□□□□□ -0.5
P06344 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
P06344 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.92□□□□□ -0.5
P06344 Gm14127-201ENSMUST00000117906 678 ntBASIC11.92□□□□□ -0.5
P06344 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.92□□□□□ -0.5
P06344 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.92□□□□□ -0.5
P06344 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.92□□□□□ -0.5
P06344 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.92□□□□□ -0.5
P06344 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Gm27486-201ENSMUST00000184923 80 ntBASIC11.92□□□□□ -0.5
P06344 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.92□□□□□ -0.5
P06344 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.92□□□□□ -0.5
P06344 Gm38671-201ENSMUST00000200573 130 ntBASIC11.92□□□□□ -0.5
P06344 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
P06344 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P06344 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
P06344 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P06344 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06344 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
P06344 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.92□□□□□ -0.5
P06344 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
P06344 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.91□□□□□ -0.5
P06344 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P06344 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
P06344 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
P06344 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Gm13612-201ENSMUST00000119276 390 ntBASIC11.91□□□□□ -0.5
P06344 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.91□□□□□ -0.5
P06344 Gm6152-201ENSMUST00000151704 340 ntBASIC11.91□□□□□ -0.5
P06344 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.91□□□□□ -0.5
P06344 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.91□□□□□ -0.5
P06344 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.91□□□□□ -0.5
P06344 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.91□□□□□ -0.5
P06344 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06344 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms