Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa3P02831 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.23□□□□□ -0.61
Hoxa3P02831 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa3P02831 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.23□□□□□ -0.61
Hoxa3P02831 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Gm15824-201ENSMUST00000119516 955 ntBASIC11.23□□□□□ -0.61
Hoxa3P02831 Gm11425-201ENSMUST00000119608 498 ntBASIC11.23□□□□□ -0.61
Hoxa3P02831 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa3P02831 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Gm6983-201ENSMUST00000214912 628 ntBASIC11.23□□□□□ -0.61
Hoxa3P02831 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa3P02831 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.23□□□□□ -0.61
Hoxa3P02831 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Gm9396-201ENSMUST00000076703 567 ntBASIC11.23□□□□□ -0.61
Hoxa3P02831 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.23□□□□□ -0.61
Hoxa3P02831 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Hoxa3P02831 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa3P02831 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa3P02831 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxa3P02831 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm12390-201ENSMUST00000117897 397 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm8652-201ENSMUST00000181363 964 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm18062-201ENSMUST00000208020 547 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm18055-201ENSMUST00000208254 547 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm17794-201ENSMUST00000220252 955 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm5161-201ENSMUST00000075243 853 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Gm24447-201ENSMUST00000083977 338 ntBASIC11.22□□□□□ -0.61
Hoxa3P02831 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Hoxa3P02831 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa3P02831 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Hoxa3P02831 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxa3P02831 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa3P02831 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.21□□□□□ -0.61
Hoxa3P02831 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxa3P02831 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.21□□□□□ -0.61
Hoxa3P02831 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms