Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.57□□□□□ -0.72
P01788 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
P01788 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.57□□□□□ -0.72
P01788 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.57□□□□□ -0.72
P01788 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
P01788 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.57□□□□□ -0.72
P01788 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.57□□□□□ -0.72
P01788 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.57□□□□□ -0.72
P01788 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.57□□□□□ -0.72
P01788 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P01788 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.57□□□□□ -0.72
P01788 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.57□□□□□ -0.72
P01788 Gm46209-201ENSMUST00000217912 553 ntBASIC10.57□□□□□ -0.72
P01788 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P01788 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
P01788 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.57□□□□□ -0.72
P01788 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P01788 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.57□□□□□ -0.72
P01788 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P01788 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01788 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
P01788 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
P01788 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P01788 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
P01788 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Gm8410-201ENSMUST00000117225 605 ntBASIC10.56□□□□□ -0.72
P01788 Gm15678-201ENSMUST00000117573 960 ntBASIC10.56□□□□□ -0.72
P01788 Gm11594-201ENSMUST00000122313 162 ntBASIC10.56□□□□□ -0.72
P01788 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.56□□□□□ -0.72
P01788 Gm27622-201ENSMUST00000183779 60 ntBASIC10.56□□□□□ -0.72
P01788 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P01788 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P01788 Gm9229-201ENSMUST00000222777 126 ntBASIC10.56□□□□□ -0.72
P01788 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P01788 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.56□□□□□ -0.72
P01788 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.56□□□□□ -0.72
P01788 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P01788 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.56□□□□□ -0.72
P01788 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.56□□□□□ -0.72
P01788 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P01788 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01788 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P01788 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P01788 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P01788 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P01788 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P01788 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P01788 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms