Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vti1bO88384 Gm12585-201ENSMUST00000117307 290 ntBASIC12.78□□□□□ -0.36
Vti1bO88384 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.78□□□□□ -0.36
Vti1bO88384 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vti1bO88384 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vti1bO88384 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vti1bO88384 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.78□□□□□ -0.36
Vti1bO88384 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.77□□□□□ -0.36
Vti1bO88384 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Vti1bO88384 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vti1bO88384 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Vti1bO88384 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vti1bO88384 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.77□□□□□ -0.37
Vti1bO88384 Gm15393-201ENSMUST00000120499 219 ntBASIC12.77□□□□□ -0.37
Vti1bO88384 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Gm21470-201ENSMUST00000187680 696 ntBASIC12.77□□□□□ -0.37
Vti1bO88384 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.77□□□□□ -0.37
Vti1bO88384 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vti1bO88384 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vti1bO88384 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vti1bO88384 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vti1bO88384 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.77□□□□□ -0.37
Vti1bO88384 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1bO88384 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vti1bO88384 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Vti1bO88384 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Gm12151-201ENSMUST00000121374 290 ntBASIC12.76□□□□□ -0.37
Vti1bO88384 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.76□□□□□ -0.37
Vti1bO88384 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.76□□□□□ -0.37
Vti1bO88384 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vti1bO88384 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Vti1bO88384 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vti1bO88384 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.76□□□□□ -0.37
Vti1bO88384 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms