Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.82■□□□□ 0.28
Vamp4O70480 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.82■□□□□ 0.28
Vamp4O70480 Gm13369-201ENSMUST00000119442 987 ntBASIC16.82■□□□□ 0.28
Vamp4O70480 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.82■□□□□ 0.28
Vamp4O70480 Gm29705-201ENSMUST00000212598 474 ntBASIC16.82■□□□□ 0.28
Vamp4O70480 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.82■□□□□ 0.28
Vamp4O70480 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.82■□□□□ 0.28
Vamp4O70480 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.82■□□□□ 0.28
Vamp4O70480 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.82■□□□□ 0.28
Vamp4O70480 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.82■□□□□ 0.28
Vamp4O70480 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vamp4O70480 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vamp4O70480 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Vamp4O70480 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.81■□□□□ 0.28
Vamp4O70480 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.81■□□□□ 0.28
Vamp4O70480 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.81■□□□□ 0.28
Vamp4O70480 Gm43433-201ENSMUST00000196573 481 ntBASIC16.81■□□□□ 0.28
Vamp4O70480 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.81■□□□□ 0.28
Vamp4O70480 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.81■□□□□ 0.28
Vamp4O70480 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.81■□□□□ 0.28
Vamp4O70480 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.81■□□□□ 0.28
Vamp4O70480 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vamp4O70480 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Vamp4O70480 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.81■□□□□ 0.28
Vamp4O70480 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vamp4O70480 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Vamp4O70480 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.8■□□□□ 0.28
Vamp4O70480 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.8■□□□□ 0.28
Vamp4O70480 Gm37922-201ENSMUST00000195596 455 ntBASIC16.8■□□□□ 0.28
Vamp4O70480 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.8■□□□□ 0.28
Vamp4O70480 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.8■□□□□ 0.28
Vamp4O70480 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.8■□□□□ 0.28
Vamp4O70480 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Vamp4O70480 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vamp4O70480 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vamp4O70480 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vamp4O70480 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vamp4O70480 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vamp4O70480 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vamp4O70480 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vamp4O70480 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Vamp4O70480 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms