Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna4O70174 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chrna4O70174 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chrna4O70174 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chrna4O70174 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.5□□□□□ -0.25
Chrna4O70174 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.5□□□□□ -0.25
Chrna4O70174 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chrna4O70174 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Chrna4O70174 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Chrna4O70174 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.5□□□□□ -0.25
Chrna4O70174 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.5□□□□□ -0.25
Chrna4O70174 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.5□□□□□ -0.25
Chrna4O70174 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Gm38223-201ENSMUST00000194484 695 ntBASIC13.5□□□□□ -0.25
Chrna4O70174 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna4O70174 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chrna4O70174 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chrna4O70174 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna4O70174 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.5□□□□□ -0.25
Chrna4O70174 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna4O70174 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Chrna4O70174 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.5□□□□□ -0.25
Chrna4O70174 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna4O70174 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.49□□□□□ -0.25
Chrna4O70174 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chrna4O70174 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chrna4O70174 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.49□□□□□ -0.25
Chrna4O70174 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.49□□□□□ -0.25
Chrna4O70174 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.49□□□□□ -0.25
Chrna4O70174 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Chrna4O70174 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.49□□□□□ -0.25
Chrna4O70174 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.49□□□□□ -0.25
Chrna4O70174 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chrna4O70174 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.49□□□□□ -0.25
Chrna4O70174 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.49□□□□□ -0.25
Chrna4O70174 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna4O70174 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chrna4O70174 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chrna4O70174 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chrna4O70174 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Chrna4O70174 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chrna4O70174 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.48□□□□□ -0.25
Chrna4O70174 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chrna4O70174 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.48□□□□□ -0.25
Chrna4O70174 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna4O70174 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.48□□□□□ -0.25
Chrna4O70174 Gm26315-201ENSMUST00000083890 321 ntBASIC13.48□□□□□ -0.25
Chrna4O70174 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms