Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.95□□□□□ -0.5
Alx4O35137 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.95□□□□□ -0.5
Alx4O35137 Gm27622-201ENSMUST00000183779 60 ntBASIC11.95□□□□□ -0.5
Alx4O35137 Gm27772-201ENSMUST00000184900 187 ntBASIC11.95□□□□□ -0.5
Alx4O35137 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Alx4O35137 Gm44335-201ENSMUST00000196879 141 ntBASIC11.95□□□□□ -0.5
Alx4O35137 Gm44297-201ENSMUST00000198304 141 ntBASIC11.95□□□□□ -0.5
Alx4O35137 Gm44346-201ENSMUST00000198851 141 ntBASIC11.95□□□□□ -0.5
Alx4O35137 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Gm17330-201ENSMUST00000221047 165 ntBASIC11.95□□□□□ -0.5
Alx4O35137 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Alx4O35137 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Alx4O35137 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Alx4O35137 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Alx4O35137 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Alx4O35137 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Alx4O35137 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.94□□□□□ -0.5
Alx4O35137 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.94□□□□□ -0.5
Alx4O35137 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Alx4O35137 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.94□□□□□ -0.5
Alx4O35137 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Gm27533-201ENSMUST00000183800 152 ntBASIC11.94□□□□□ -0.5
Alx4O35137 Gm10253-201ENSMUST00000194270 940 ntBASIC11.94□□□□□ -0.5
Alx4O35137 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Alx4O35137 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Alx4O35137 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Alx4O35137 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.94□□□□□ -0.5
Alx4O35137 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Alx4O35137 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Alx4O35137 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Alx4O35137 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Alx4O35137 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Alx4O35137 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Alx4O35137 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Alx4O35137 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Alx4O35137 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.93□□□□□ -0.5
Alx4O35137 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Gm15240-201ENSMUST00000118156 720 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Gm6415-201ENSMUST00000118488 348 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.93□□□□□ -0.5
Alx4O35137 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Alx4O35137 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.93□□□□□ -0.5
Alx4O35137 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Alx4O35137 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Alx4O35137 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.93□□□□□ -0.5
Alx4O35137 Gm25144-201ENSMUST00000179561 110 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Gm25352-201ENSMUST00000179815 110 ntBASIC11.93□□□□□ -0.5
Alx4O35137 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.93□□□□□ -0.5
Alx4O35137 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.93□□□□□ -0.5
Alx4O35137 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms