Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Gm8927-201ENSMUST00000181978 981 ntBASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.19□□□□□ -0.46
Shisa8J3QNX5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Gm3222-201ENSMUST00000071282 990 ntBASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Gm16476-201ENSMUST00000221544 139 ntBASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shisa8J3QNX5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm11779-201ENSMUST00000118541 368 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm9824-201ENSMUST00000178707 561 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm33320-201ENSMUST00000192232 530 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Gm44771-201ENSMUST00000206975 626 ntBASIC12.17□□□□□ -0.46
Shisa8J3QNX5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms