Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gm6376-201ENSMUST00000209407 580 ntBASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim55G3X8Y1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trim55G3X8Y1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.71□□□□□ -0.22
Trim55G3X8Y1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Gm7862-201ENSMUST00000121461 292 ntBASIC13.7□□□□□ -0.22
Trim55G3X8Y1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms