Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdh1F7BJK1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm6912-201ENSMUST00000117218 544 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm15653-201ENSMUST00000119247 907 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Mir1897-201ENSMUST00000122581 272 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm26308-201ENSMUST00000157768 69 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm4804-201ENSMUST00000182234 999 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm10766-202ENSMUST00000194123 606 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm10253-201ENSMUST00000194270 940 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Shd-206ENSMUST00000225145 998 ntBASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh1F7BJK1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Mir7221-201ENSMUST00000184009 72 ntBASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh1F7BJK1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Gm5312-201ENSMUST00000203728 547 ntBASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Gm45841-201ENSMUST00000207700 164 ntBASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Gm9229-201ENSMUST00000222777 126 ntBASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh1F7BJK1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms