Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Gm3508-201ENSMUST00000186012 792 ntBASIC15.02■□□□□ -0
Syngap1F6SEU4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Gm29705-201ENSMUST00000212598 474 ntBASIC15.02■□□□□ -0
Syngap1F6SEU4 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.02■□□□□ -0
Syngap1F6SEU4 Gm8227-201ENSMUST00000223306 571 ntBASIC15.02■□□□□ -0
Syngap1F6SEU4 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.02■□□□□ -0
Syngap1F6SEU4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.02■□□□□ -0
Syngap1F6SEU4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Syngap1F6SEU4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Syngap1F6SEU4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm29741-201ENSMUST00000192667 421 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm6621-201ENSMUST00000193251 772 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Syngap1F6SEU4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15□□□□□ -0.01
Syngap1F6SEU4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15□□□□□ -0.01
Syngap1F6SEU4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15□□□□□ -0.01
Syngap1F6SEU4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Gm8598-201ENSMUST00000221184 836 ntBASIC15□□□□□ -0.01
Syngap1F6SEU4 CT030704.2-201ENSMUST00000228887 494 ntBASIC15□□□□□ -0.01
Syngap1F6SEU4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms