Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm7049-201ENSMUST00000223520 1712 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm15707-201ENSMUST00000118804 996 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm45094-201ENSMUST00000207013 617 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Mmp14-206ENSMUST00000225641 3238 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Mir698-201ENSMUST00000102164 109 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm11560-201ENSMUST00000117567 948 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm38103-201ENSMUST00000191707 864 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm45925-201ENSMUST00000218882 744 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm9785-201ENSMUST00000062642 1006 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm43205-201ENSMUST00000198622 1968 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm11836-201ENSMUST00000121022 441 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm23400-201ENSMUST00000174994 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm26463-201ENSMUST00000175065 101 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm24332-201ENSMUST00000175102 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm25959-201ENSMUST00000175112 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm22475-201ENSMUST00000175169 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm22903-201ENSMUST00000175193 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm25070-201ENSMUST00000175237 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm24159-201ENSMUST00000175264 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm25299-201ENSMUST00000175283 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm23798-201ENSMUST00000175560 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm23802-201ENSMUST00000175565 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm25708-201ENSMUST00000177687 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm24370-201ENSMUST00000178007 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm23049-201ENSMUST00000178068 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm28019-201ENSMUST00000178138 101 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm25571-201ENSMUST00000178322 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm25355-201ENSMUST00000178456 101 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm24975-201ENSMUST00000178492 101 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm23189-201ENSMUST00000178954 102 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm25100-201ENSMUST00000179750 101 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm23064-201ENSMUST00000179866 101 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Mir8093-201ENSMUST00000185043 137 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 AC115304.2-201ENSMUST00000226399 332 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Gm8615-201ENSMUST00000025307 771 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Herc1E9PZP8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC7.24□□□□□ -1.25
Herc1E9PZP8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Herc1E9PZP8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Gm14524-201ENSMUST00000121066 683 ntBASIC7.23□□□□□ -1.25
Herc1E9PZP8 Gm44647-201ENSMUST00000207402 428 ntBASIC7.23□□□□□ -1.25
Herc1E9PZP8 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Herc1E9PZP8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms