Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh17E9PXF0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm17330-201ENSMUST00000221047 165 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh17E9PXF0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Gm6007-201ENSMUST00000208170 823 ntBASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pcdh17E9PXF0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdh17E9PXF0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Gm13392-201ENSMUST00000117708 150 ntBASIC12.45□□□□□ -0.42
Pcdh17E9PXF0 Gm5687-201ENSMUST00000118252 640 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms