Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Gm43703-201ENSMUST00000200523 763 ntBASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Gm7775-201ENSMUST00000218871 853 ntBASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm28043E0CXC2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Gm15460-201ENSMUST00000118147 391 ntBASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Gm37714-201ENSMUST00000194742 342 ntBASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.43□□□□□ -0.26
Gm28043E0CXC2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.42□□□□□ -0.26
Gm28043E0CXC2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm28043E0CXC2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms