Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hfm1D3Z4R1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hfm1D3Z4R1 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 AU022133-201ENSMUST00000200601 873 ntBASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Gm44545-201ENSMUST00000208262 746 ntBASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 AC167013.1-201ENSMUST00000228592 202 ntBASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Hfm1D3Z4R1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Gm6963-201ENSMUST00000147879 379 ntBASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Gm23699-201ENSMUST00000158835 135 ntBASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Spcs1-203ENSMUST00000226374 592 ntBASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Gm6992-201ENSMUST00000217973 1607 ntBASIC18.44■□□□□ 0.54
Hfm1D3Z4R1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Gm12266-201ENSMUST00000120311 962 ntBASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Gm12291-201ENSMUST00000121627 311 ntBASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Gm18730-201ENSMUST00000218038 343 ntBASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Dhrs4-202ENSMUST00000226168 828 ntBASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Gm10312-201ENSMUST00000078515 489 ntBASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Hfm1D3Z4R1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hfm1D3Z4R1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hfm1D3Z4R1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hfm1D3Z4R1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Hfm1D3Z4R1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.42■□□□□ 0.54
Hfm1D3Z4R1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hfm1D3Z4R1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hfm1D3Z4R1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms