Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Mir6998-201ENSMUST00000183343 64 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm29615-201ENSMUST00000185371 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm28224-201ENSMUST00000186078 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm29001-201ENSMUST00000186177 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm28292-201ENSMUST00000186593 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm28101-201ENSMUST00000187608 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm29076-201ENSMUST00000187689 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm28302-201ENSMUST00000187931 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm28646-201ENSMUST00000188220 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm28205-201ENSMUST00000189177 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm29032-201ENSMUST00000189797 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm28695-201ENSMUST00000190300 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm37448-201ENSMUST00000192795 697 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Trav11n-201ENSMUST00000200113 343 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.72□□□□□ -0.69
Chd6A3KFM7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd6A3KFM7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm13549-201ENSMUST00000118339 796 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Ginm1-202ENSMUST00000065124 300 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm9507-202ENSMUST00000180157 654 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm28388-201ENSMUST00000186262 437 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 AY036118-201ENSMUST00000200021 923 ntBASIC10.71□□□□□ -0.69
Chd6A3KFM7 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chd6A3KFM7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Gm12783-201ENSMUST00000121425 397 ntBASIC10.71□□□□□ -0.7
Chd6A3KFM7 Gm23771-201ENSMUST00000178702 110 ntBASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms