Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Gm15240-201ENSMUST00000118156 720 ntBASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Gm4875-201ENSMUST00000118257 786 ntBASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Gm17795-201ENSMUST00000214505 757 ntBASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Gm7775-201ENSMUST00000218871 853 ntBASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Gm9063-201ENSMUST00000223299 582 ntBASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc194A0A140LIT1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc194A0A140LIT1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms