Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb3S4R1G7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.09□□□□□ -0.47
H2afb3S4R1G7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
H2afb3S4R1G7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afb3S4R1G7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afb3S4R1G7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afb3S4R1G7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afb3S4R1G7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Gm22175-201ENSMUST00000175007 78 ntBASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Gm37935-201ENSMUST00000192012 982 ntBASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb3S4R1G7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Mir874-201ENSMUST00000104769 76 ntBASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms