Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CcsQ9WU84 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm6973-201ENSMUST00000117080 721 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm11543-201ENSMUST00000120758 370 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.42□□□□□ -0.74
CcsQ9WU84 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm44335-201ENSMUST00000196879 141 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm44297-201ENSMUST00000198304 141 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm44346-201ENSMUST00000198851 141 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm43125-201ENSMUST00000201724 730 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.42□□□□□ -0.74
CcsQ9WU84 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.42□□□□□ -0.74
CcsQ9WU84 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CcsQ9WU84 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.42□□□□□ -0.74
CcsQ9WU84 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Gm43474-201ENSMUST00000196415 774 ntBASIC10.41□□□□□ -0.74
CcsQ9WU84 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.41□□□□□ -0.74
CcsQ9WU84 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms