Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40aQ9R1C7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Gm18041-201ENSMUST00000218210 618 ntBASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40aQ9R1C7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Gm15770-201ENSMUST00000117498 584 ntBASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Gm12859-201ENSMUST00000117834 427 ntBASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Gm32390-201ENSMUST00000212713 1172 ntBASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms