Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm6447-201ENSMUST00000118905 835 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm11803-201ENSMUST00000119966 444 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm7561-201ENSMUST00000211203 886 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf3Q9QXK7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Gm10156-201ENSMUST00000122364 462 ntBASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf3Q9QXK7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gm43433-201ENSMUST00000196573 481 ntBASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf3Q9QXK7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms