Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm11978-201ENSMUST00000122315 466 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm29705-201ENSMUST00000212598 474 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Gm25857-201ENSMUST00000082788 129 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.2□□□□□ -0.46
Prg4Q9JM99 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Prg4Q9JM99 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Prg4Q9JM99 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gm13226-201ENSMUST00000117838 404 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gm11637-201ENSMUST00000120601 592 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gm45784-201ENSMUST00000188360 142 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.19□□□□□ -0.46
Prg4Q9JM99 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Prg4Q9JM99 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Snora78-201ENSMUST00000158630 128 ntBASIC12.18□□□□□ -0.46
Prg4Q9JM99 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Gm26927-201ENSMUST00000182385 965 ntBASIC12.18□□□□□ -0.46
Prg4Q9JM99 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Prg4Q9JM99 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms