Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trem1Q9JKE2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trem1Q9JKE2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Gm14042-201ENSMUST00000120139 833 ntBASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trem1Q9JKE2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Gm7222-201ENSMUST00000117512 906 ntBASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Gm15173-201ENSMUST00000122049 433 ntBASIC11.97□□□□□ -0.49
Trem1Q9JKE2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms