Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12616-201ENSMUST00000118594 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm26361-201ENSMUST00000158868 186 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12624-201ENSMUST00000177615 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12621-201ENSMUST00000177760 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12615-201ENSMUST00000177970 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12622-201ENSMUST00000177975 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12627-201ENSMUST00000178412 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12625-201ENSMUST00000179122 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12614-201ENSMUST00000179586 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12613-201ENSMUST00000180323 382 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm45118-201ENSMUST00000208928 825 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-4Q9EQM3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm11930-201ENSMUST00000117788 190 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm27046-201ENSMUST00000182160 463 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm3508-201ENSMUST00000186012 792 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm5950-201ENSMUST00000213337 772 ntBASIC13.67□□□□□ -0.22
Nkx2-4Q9EQM3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms