Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf1Q9EPU4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf1Q9EPU4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf1Q9EPU4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf1Q9EPU4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Gm7046-201ENSMUST00000221351 977 ntBASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Gm44775-201ENSMUST00000207266 1456 ntBASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Gm38157-201ENSMUST00000194178 1698 ntBASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf1Q9EPU4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Gm13350-201ENSMUST00000120519 479 ntBASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.25■□□□□ 0.51
Cpsf1Q9EPU4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Gm43416-201ENSMUST00000201916 1015 ntBASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf1Q9EPU4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm38266-201ENSMUST00000194931 421 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Gm43822-201ENSMUST00000200285 476 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf1Q9EPU4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms