Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Gm15693-201ENSMUST00000120470 637 ntBASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Chmp5Q9D7S9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Gm27622-201ENSMUST00000183779 60 ntBASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp5Q9D7S9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Mir874-201ENSMUST00000104769 76 ntBASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Gm8410-201ENSMUST00000117225 605 ntBASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp5Q9D7S9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Gm44771-201ENSMUST00000206975 626 ntBASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp5Q9D7S9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms