Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Mir6956-201ENSMUST00000183598 62 ntBASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc7Q9D541 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Gm12151-201ENSMUST00000121374 290 ntBASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.65■□□□□ 0.1
Ccdc7Q9D541 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.65■□□□□ 0.1
Ccdc7Q9D541 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc7Q9D541 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc7Q9D541 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc7Q9D541 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc7Q9D541 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc7Q9D541 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc7Q9D541 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms