Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm27892-201ENSMUST00000185017 106 ntBASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.74□□□□□ -0.21
Vps28Q9D1C8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm6244-201ENSMUST00000178732 841 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm8602-201ENSMUST00000184045 607 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm29608-201ENSMUST00000190444 463 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm38144-201ENSMUST00000192790 465 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm18187-201ENSMUST00000196476 984 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm8463-201ENSMUST00000208573 613 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm17794-201ENSMUST00000220252 955 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vps28Q9D1C8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Gm5035-201ENSMUST00000215581 927 ntBASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vps28Q9D1C8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps28Q9D1C8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms