Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Gm12585-201ENSMUST00000117307 290 ntBASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Mir1897-201ENSMUST00000122581 272 ntBASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Gm28630-201ENSMUST00000187806 498 ntBASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ssu72Q9CY97 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm15240-201ENSMUST00000118156 720 ntBASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm27772-201ENSMUST00000184900 187 ntBASIC13.29□□□□□ -0.28
Ssu72Q9CY97 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Shd-206ENSMUST00000225145 998 ntBASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ssu72Q9CY97 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms