Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RpainQ9CWY9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Gm15653-201ENSMUST00000119247 907 ntBASIC14.03□□□□□ -0.16
RpainQ9CWY9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.03□□□□□ -0.16
RpainQ9CWY9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.03□□□□□ -0.16
RpainQ9CWY9 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.03□□□□□ -0.16
RpainQ9CWY9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RpainQ9CWY9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RpainQ9CWY9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RpainQ9CWY9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Gm4875-201ENSMUST00000118257 786 ntBASIC14.02□□□□□ -0.17
RpainQ9CWY9 Gm15321-201ENSMUST00000121290 288 ntBASIC14.02□□□□□ -0.17
RpainQ9CWY9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.02□□□□□ -0.17
RpainQ9CWY9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.02□□□□□ -0.17
RpainQ9CWY9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.02□□□□□ -0.17
RpainQ9CWY9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.02□□□□□ -0.17
RpainQ9CWY9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RpainQ9CWY9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.01□□□□□ -0.17
RpainQ9CWY9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Gm7488-201ENSMUST00000117148 684 ntBASIC14.01□□□□□ -0.17
RpainQ9CWY9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.01□□□□□ -0.17
RpainQ9CWY9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.01□□□□□ -0.17
RpainQ9CWY9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RpainQ9CWY9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms