Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Gm18206-201ENSMUST00000207027 926 ntBASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ddx47Q9CWX9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Mir874-201ENSMUST00000104769 76 ntBASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gm38225-201ENSMUST00000194001 393 ntBASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ddx47Q9CWX9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ddx47Q9CWX9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ddx47Q9CWX9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms