Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx28Q9CWT6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ddx28Q9CWT6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx28Q9CWT6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx28Q9CWT6 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.6□□□□□ -0.39
Ddx28Q9CWT6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.6□□□□□ -0.39
Ddx28Q9CWT6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ddx28Q9CWT6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.58□□□□□ -0.39
Ddx28Q9CWT6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ddx28Q9CWT6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm15653-201ENSMUST00000119247 907 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm22175-201ENSMUST00000175007 78 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm25144-201ENSMUST00000179561 110 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm25352-201ENSMUST00000179815 110 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm27622-201ENSMUST00000183779 60 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm10576-201ENSMUST00000191927 825 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ddx28Q9CWT6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Gm27533-201ENSMUST00000183800 152 ntBASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.57□□□□□ -0.4
Ddx28Q9CWT6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms