Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Smc1aQ9CU62 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Smc1aQ9CU62 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Smc1aQ9CU62 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.02■□□□□ -0
Smc1aQ9CU62 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Gm10275-202ENSMUST00000168697 495 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 Gm9002-201ENSMUST00000178437 499 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 Gm5354-201ENSMUST00000182417 973 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 Gm6266-201ENSMUST00000203844 806 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc1aQ9CU62 Gm10275-201ENSMUST00000092620 635 ntBASIC15.02■□□□□ -0
Smc1aQ9CU62 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc1aQ9CU62 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.01□□□□□ -0.01
Smc1aQ9CU62 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc1aQ9CU62 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Gm12960-201ENSMUST00000120017 1066 ntBASIC15□□□□□ -0.01
Smc1aQ9CU62 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Gm17150-201ENSMUST00000165577 381 ntBASIC15□□□□□ -0.01
Smc1aQ9CU62 Mir7085-201ENSMUST00000184353 66 ntBASIC15□□□□□ -0.01
Smc1aQ9CU62 AC153872.1-201ENSMUST00000199539 128 ntBASIC15□□□□□ -0.01
Smc1aQ9CU62 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15□□□□□ -0.01
Smc1aQ9CU62 AC238811.3-201ENSMUST00000225422 709 ntBASIC15□□□□□ -0.01
Smc1aQ9CU62 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smc1aQ9CU62 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc1aQ9CU62 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms