Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim16Q99PP9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim16Q99PP9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim16Q99PP9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Gm29741-201ENSMUST00000192667 421 ntBASIC13.12□□□□□ -0.31
Trim16Q99PP9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.12□□□□□ -0.31
Trim16Q99PP9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim16Q99PP9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.11□□□□□ -0.31
Trim16Q99PP9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.11□□□□□ -0.31
Trim16Q99PP9 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.11□□□□□ -0.31
Trim16Q99PP9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.11□□□□□ -0.31
Trim16Q99PP9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim16Q99PP9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim16Q99PP9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms