Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Gm15460-201ENSMUST00000118147 391 ntBASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Gm8927-201ENSMUST00000181978 981 ntBASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Gm3222-201ENSMUST00000071282 990 ntBASIC13.15□□□□□ -0.3
Trim8Q99PJ2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim8Q99PJ2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim8Q99PJ2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm22065-201ENSMUST00000103753 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm22066-201ENSMUST00000103761 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24932-201ENSMUST00000103763 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24115-201ENSMUST00000103799 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm22190-201ENSMUST00000103827 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm22191-201ENSMUST00000103831 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24721-201ENSMUST00000103849 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm28018-201ENSMUST00000103869 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm26399-201ENSMUST00000103937 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm25349-201ENSMUST00000177728 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm23616-201ENSMUST00000177797 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm25871-201ENSMUST00000177816 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24752-201ENSMUST00000178240 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24496-201ENSMUST00000178287 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm25649-201ENSMUST00000178476 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm25548-201ENSMUST00000178681 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm23147-201ENSMUST00000178841 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm26095-201ENSMUST00000179270 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm22171-201ENSMUST00000179283 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm23936-201ENSMUST00000179354 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm22619-201ENSMUST00000179516 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm25255-201ENSMUST00000179579 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24755-201ENSMUST00000179691 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm26506-201ENSMUST00000179692 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm25086-201ENSMUST00000179931 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm23243-201ENSMUST00000180047 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24659-201ENSMUST00000180212 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm24169-201ENSMUST00000180244 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm23689-201ENSMUST00000180354 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm27359-201ENSMUST00000184153 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm27785-201ENSMUST00000184268 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm27466-201ENSMUST00000184396 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm27703-201ENSMUST00000184836 110 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm5312-201ENSMUST00000203728 547 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm44719-201ENSMUST00000206404 149 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim8Q99PJ2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms