Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkd1Q99MH6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nkd1Q99MH6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Nkd1Q99MH6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkd1Q99MH6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm14701-201ENSMUST00000117156 348 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm12585-201ENSMUST00000117307 290 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm15770-201ENSMUST00000117498 584 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm26308-201ENSMUST00000157768 69 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm25948-201ENSMUST00000175334 112 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm24420-201ENSMUST00000176676 59 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkd1Q99MH6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms