Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm3961-201ENSMUST00000204425 994 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Scrt1Q99M85 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.76□□□□□ -0.53
Scrt1Q99M85 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Gm44397-201ENSMUST00000195950 113 ntBASIC11.75□□□□□ -0.53
Scrt1Q99M85 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.75□□□□□ -0.53
Scrt1Q99M85 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.75□□□□□ -0.53
Scrt1Q99M85 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scrt1Q99M85 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.75□□□□□ -0.53
Scrt1Q99M85 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Gm16570-201ENSMUST00000161951 436 ntBASIC11.74□□□□□ -0.53
Scrt1Q99M85 Proscos-202ENSMUST00000178990 666 ntBASIC11.74□□□□□ -0.53
Scrt1Q99M85 Gm29705-201ENSMUST00000212598 474 ntBASIC11.74□□□□□ -0.53
Scrt1Q99M85 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.74□□□□□ -0.53
Scrt1Q99M85 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.74□□□□□ -0.53
Scrt1Q99M85 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scrt1Q99M85 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms