Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gm14701-201ENSMUST00000117156 348 ntBASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gm26308-201ENSMUST00000157768 69 ntBASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cdk5rap3Q99LM2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Gm18905-201ENSMUST00000205454 928 ntBASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdk5rap3Q99LM2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.9□□□□□ -0.19
Cdk5rap3Q99LM2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.9□□□□□ -0.19
Cdk5rap3Q99LM2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdk5rap3Q99LM2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Cdk5rap3Q99LM2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdk5rap3Q99LM2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.9□□□□□ -0.19
Cdk5rap3Q99LM2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Gm23935-201ENSMUST00000102303 57 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Gm24270-201ENSMUST00000102326 57 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Mir874-201ENSMUST00000104769 76 ntBASIC13.89□□□□□ -0.19
Cdk5rap3Q99LM2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms