Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm28196-201ENSMUST00000187719 640 ntBASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm43138-201ENSMUST00000199123 708 ntBASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm32025-201ENSMUST00000217960 307 ntBASIC14.07□□□□□ -0.16
Clp1Q99LI9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.07□□□□□ -0.16
Clp1Q99LI9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clp1Q99LI9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.06□□□□□ -0.16
Clp1Q99LI9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.06□□□□□ -0.16
Clp1Q99LI9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.06□□□□□ -0.16
Clp1Q99LI9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clp1Q99LI9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.05□□□□□ -0.16
Clp1Q99LI9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm17208-201ENSMUST00000168388 535 ntBASIC14.05□□□□□ -0.16
Clp1Q99LI9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.05□□□□□ -0.16
Clp1Q99LI9 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.05□□□□□ -0.16
Clp1Q99LI9 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.05□□□□□ -0.16
Clp1Q99LI9 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.05□□□□□ -0.16
Clp1Q99LI9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clp1Q99LI9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clp1Q99LI9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms