Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf1Q99LC2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cstf1Q99LC2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cstf1Q99LC2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Cstf1Q99LC2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Gm16505-201ENSMUST00000179981 232 ntBASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cstf1Q99LC2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm11618-201ENSMUST00000117946 267 ntBASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm4986-201ENSMUST00000119731 549 ntBASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm6222-202ENSMUST00000182143 629 ntBASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm27341-201ENSMUST00000183570 106 ntBASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm38144-201ENSMUST00000192790 465 ntBASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cstf1Q99LC2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cstf1Q99LC2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms