Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lims1Q99JW4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.24□□□□□ -0.45
Lims1Q99JW4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lims1Q99JW4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lims1Q99JW4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.24□□□□□ -0.45
Lims1Q99JW4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lims1Q99JW4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm27430-201ENSMUST00000184585 107 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm44333-201ENSMUST00000197168 107 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.23□□□□□ -0.45
Lims1Q99JW4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lims1Q99JW4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.22□□□□□ -0.45
Lims1Q99JW4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Gm22175-201ENSMUST00000175007 78 ntBASIC12.22□□□□□ -0.45
Lims1Q99JW4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lims1Q99JW4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms