Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Thumpd1Q99J36 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Thumpd1Q99J36 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Thumpd1Q99J36 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Thumpd1Q99J36 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Thumpd1Q99J36 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm15653-201ENSMUST00000119247 907 ntBASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm27494-201ENSMUST00000184735 189 ntBASIC11.95□□□□□ -0.5
Thumpd1Q99J36 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm45841-201ENSMUST00000207700 164 ntBASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Thumpd1Q99J36 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Mir1895-201ENSMUST00000122615 79 ntBASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Mzt1-203ENSMUST00000227948 952 ntBASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Thumpd1Q99J36 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Thumpd1Q99J36 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms