Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Gm42550-201ENSMUST00000201553 960 ntBASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Gm38223-201ENSMUST00000194484 695 ntBASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb1Q91Y08 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Gm12341-201ENSMUST00000119724 503 ntBASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb1Q91Y08 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb1Q91Y08 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms