Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trex1Q91XB0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Gm6023-201ENSMUST00000118217 606 ntBASIC15.29■□□□□ 0.04
Trex1Q91XB0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Gm45865-201ENSMUST00000211815 945 ntBASIC15.29■□□□□ 0.04
Trex1Q91XB0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trex1Q91XB0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Gm12241-201ENSMUST00000118330 726 ntBASIC15.28■□□□□ 0.04
Trex1Q91XB0 Gm11978-201ENSMUST00000122315 466 ntBASIC15.28■□□□□ 0.04
Trex1Q91XB0 Gm3890-201ENSMUST00000182416 207 ntBASIC15.28■□□□□ 0.04
Trex1Q91XB0 Gm38341-201ENSMUST00000195357 515 ntBASIC15.28■□□□□ 0.04
Trex1Q91XB0 Gm4768-201ENSMUST00000206199 686 ntBASIC15.28■□□□□ 0.04
Trex1Q91XB0 Gm8227-201ENSMUST00000223306 571 ntBASIC15.28■□□□□ 0.04
Trex1Q91XB0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trex1Q91XB0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.28■□□□□ 0.04
Trex1Q91XB0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trex1Q91XB0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.27■□□□□ 0.04
Trex1Q91XB0 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.27■□□□□ 0.04
Trex1Q91XB0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.27■□□□□ 0.04
Trex1Q91XB0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trex1Q91XB0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trex1Q91XB0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms