Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp3Q91W36 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Usp3Q91W36 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp3Q91W36 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm24196-201ENSMUST00000179161 110 ntBASIC13.82□□□□□ -0.2
Usp3Q91W36 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.82□□□□□ -0.2
Usp3Q91W36 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.82□□□□□ -0.2
Usp3Q91W36 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm8598-201ENSMUST00000221184 836 ntBASIC13.82□□□□□ -0.2
Usp3Q91W36 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.82□□□□□ -0.2
Usp3Q91W36 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.82□□□□□ -0.2
Usp3Q91W36 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usp3Q91W36 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp3Q91W36 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp3Q91W36 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Usp3Q91W36 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp3Q91W36 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.81□□□□□ -0.2
Usp3Q91W36 Gm7561-201ENSMUST00000211203 886 ntBASIC13.81□□□□□ -0.2
Usp3Q91W36 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.81□□□□□ -0.2
Usp3Q91W36 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Usp3Q91W36 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp3Q91W36 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.81□□□□□ -0.2
Usp3Q91W36 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp3Q91W36 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Usp3Q91W36 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.8□□□□□ -0.2
Usp3Q91W36 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.8□□□□□ -0.2
Usp3Q91W36 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Usp3Q91W36 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.8□□□□□ -0.2
Usp3Q91W36 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.8□□□□□ -0.2
Usp3Q91W36 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Gm13829-201ENSMUST00000119600 138 ntBASIC13.8□□□□□ -0.2
Usp3Q91W36 Gm10156-201ENSMUST00000122364 462 ntBASIC13.8□□□□□ -0.2
Usp3Q91W36 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp3Q91W36 Gm27839-201ENSMUST00000184242 106 ntBASIC13.8□□□□□ -0.2
Usp3Q91W36 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 188.6 ms