Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H1fooQ8VIK3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
H1fooQ8VIK3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H1fooQ8VIK3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Mir8102-201ENSMUST00000184148 139 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.24□□□□□ -0.61
H1fooQ8VIK3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
H1fooQ8VIK3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gm15487-201ENSMUST00000122373 465 ntBASIC11.23□□□□□ -0.61
H1fooQ8VIK3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Mir7684-201ENSMUST00000183858 60 ntBASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gm18041-201ENSMUST00000218210 618 ntBASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H1fooQ8VIK3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H1fooQ8VIK3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms