Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.26□□□□□ -0.13
TraipQ8VIG6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gm11978-201ENSMUST00000122315 466 ntBASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gm19184-201ENSMUST00000196798 928 ntBASIC14.26□□□□□ -0.13
TraipQ8VIG6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gm6007-201ENSMUST00000208170 823 ntBASIC14.26□□□□□ -0.13
TraipQ8VIG6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Gm6013-201ENSMUST00000212264 699 ntBASIC14.25□□□□□ -0.13
TraipQ8VIG6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.25□□□□□ -0.13
TraipQ8VIG6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.25□□□□□ -0.13
TraipQ8VIG6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.25□□□□□ -0.13
TraipQ8VIG6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm16379-201ENSMUST00000161469 348 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm8762-201ENSMUST00000193486 339 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 Thoc7-209ENSMUST00000225325 765 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.24□□□□□ -0.13
TraipQ8VIG6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms