Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Gm17271-201ENSMUST00000165535 355 ntBASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Gm45612-201ENSMUST00000211320 160 ntBASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc58Q8R3Q6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.02□□□□□ -0.48
Ccdc58Q8R3Q6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Gm37714-201ENSMUST00000194742 342 ntBASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc58Q8R3Q6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms