Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Rubie-203ENSMUST00000227803 2430 ntBASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sf3a1Q8K4Z5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm8463-201ENSMUST00000208573 613 ntBASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm7653-201ENSMUST00000214567 508 ntBASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sf3a1Q8K4Z5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sf3a1Q8K4Z5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms