Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm46209-201ENSMUST00000217912 553 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc87Q8CDL9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc87Q8CDL9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Mir7684-201ENSMUST00000183858 60 ntBASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Gm6916-202ENSMUST00000205523 195 ntBASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms